LOCUS BG085581 649 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115A07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115A07 5', mRNA sequence. ACCESSION BG085581 VERSION BG085581.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 649) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085581.1. Other_ESTs: H3115A07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: A column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..649 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115A07-5" /db_xref="taxon:10090" /clone="H3115A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 137 a 178 c 189 g 145 t ORIGIN 1 gtctacggtc ctggggagcc gctggctggg accgtgcact tgcgcctggg agcgccactg 61 cccttccgag ttatccgggt gacctgcatg ggttcctgtg gggtctccac caaggccaac 121 gatggggcat gggtggtgga ggagagctac ttcaacagct ccctgtcact ggctgacaag 181 ggaagtctgc cggctggaga gcacaacttc ccttttcagt tcctgcttcc tgccacagca 241 cccacatctt ttgagggacc ctttgggaag attgtacacc aggtgagggc gtccatcgac 301 actccacgtt tttccaagga tcacaaatgt agcctcgtgt tctacatcct gagccccttg 361 aacctgaaca gcatcccaga tattgagcaa cccaatgtgg cctccactac caagaagttc 421 tcctataagc tggtgaagac tggcaatgtg gttctcacag ctagcactga ccttcgtggc 481 tatgtggtgg gacaggtgct gcggctgcag gctgacattg agaaccagtc aggcaaggac 541 accagccctg tggtggccag cttgctacag aaggtatcct ataaggccaa gcgctggatc 601 tatgatgtgc ggaccattgc agaggtggag ggtacaggtg tcaaggcct //