LOCUS BG085031 717 bp mRNA linear EST 12-MAY-2010 DEFINITION H3107H03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3107H03 5', mRNA sequence. ACCESSION BG085031 VERSION BG085031.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 717) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085031.1. Other_ESTs: H3107H03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3107 row: H column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..717 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3107H03-5" /db_xref="taxon:10090" /clone="H3107H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 165 c 146 g 207 t ORIGIN 1 caggttcagt tccaagtact gatgtggtgg ctcataatca tctgtaaact taattctggg 61 aggcctctgg tgtcctcttt gacaccaaac acttatggtg cacatacata tatgcaggac 121 ccattcaaga cccatgcaca caaaaaatgt tccctgcatt tcatgaaagc ctgcttcact 181 tgtttgagtc taagtgctaa aaccaagatc cttgatttaa aactgggtgt cttagtcagg 241 gtttgtattt ctgcacaaaa catcatgacc aagaagcaag ttggggagaa aagagtttat 301 tcagcttaca cttctacact gctgttcaac accaaaggaa gtcataactg gaactcacac 361 agggtagaaa tctggaggca gaagctgatg aagaagccat ggaggggtac tgcttattgg 421 cttgcttccc ctggcttgct caacttcgtt tcttataaaa tccagtacta ccagcccagg 481 gatggcacca cccacaatag gtcctctcac gttttatcat taattgagaa aatgccttac 541 agctggatct catggaggca tttcctcaag ggaggttact ttctctgtga taactccagc 601 ttgtgtcaag ttgacacaca aaaccggcct ctacactggc ttttacttag aagtttcttg 661 gaagatattt actggtcctg cagactcctg tcacttctat cagctaattc atgttga //