LOCUS BG084986 667 bp mRNA linear EST 12-MAY-2010 DEFINITION H3107C12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3107C12 5', mRNA sequence. ACCESSION BG084986 VERSION BG084986.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 667) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084986.1. Other_ESTs: H3107C12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3107 row: C column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..667 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3107C12-5" /db_xref="taxon:10090" /clone="H3107C12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 238 a 119 c 109 g 201 t ORIGIN 1 cacaaccatc tgtaatgagg actagtgccc tctcctggct tgcaggcata aatgcaggca 61 gaacacttaa taaatagata aatcttttta aaaaaagaga aagaaaaaaa aaaagctctc 121 ttttaatgtc ccagatttgt acatagtaga gttgattgat tttgttggaa acattgaagt 181 tatttctttc ttgttgagta gacagactga aatttattaa tatttatttt taatgctaat 241 aatcttcagc tactaaaccc taacatgaga gttgttcttt gacttctaca tgttgacttc 301 taagacatga tctaaataaa ttttgactga ataacatttg gaagcttttg caaacaaatt 361 tcactcaaat tacatacaaa tagtaaattc tagtaggtga aaaagacagt tctactttaa 421 atactacaga attccctata aataaatttt aaagaaccaa acaccacaga accaaaaact 481 gtctctaagg taaagttaac tatagccata atgtaagatt gagtaccgca tagttacagc 541 ccacaatatt tctactccat aagaatttca catataagcc gggcatggtg gcactcgcct 601 ttaatcccag cactcaggag gcagaggcag gcggatttct gagttcgagg ccagcttggt 661 ttacaga //