LOCUS BG084909 590 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105E02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105E02 5', mRNA sequence. ACCESSION BG084909 VERSION BG084909.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 590) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084909.1. Other_ESTs: H3105E02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: E column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..590 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105E02-5" /db_xref="taxon:10090" /clone="H3105E02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 168 a 106 c 98 g 218 t ORIGIN 1 gtgttaacaa atatgcaaag aattctgaat gcaaatggtt tgaaatttta aggccttcct 61 aagtagttat tctaagagaa ttcattttga aggtataaga ctgctctctg tctatcactc 121 atagtatgat aatttgtatt ctgataaaag aaaaaatgca aattaaaata ttgggccacc 181 ttgtatgtgt ggtacaaact cctcctctcc cccttcactc cctcctttct cttttgagta 241 tcgtgctgca tagtagaaag ctttgcgata aaatctcaga caaccaggaa gcgaaatcac 301 tggcctttaa gatttgtgtt ttcccactca tgtctgtgtc atgtgcacat acatacctgc 361 tcacaggcac tcaaggctga gtttacagtt caccattgtt agagattcat acaggttttt 421 gtttgtttgt ttgacagttt ctttgtcacc agagctgcag ttattagtga cataatgtga 481 caatttctta atttctcctt cataattatt cctttatgga atttcttcta cttttgcaca 541 aatttgagtt ttagttttga ttttgaaata attgtataag ttgtaaaata //