LOCUS BG084656 599 bp mRNA linear EST 26-JAN-2001
DEFINITION H3103E02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3103E02 5', mRNA sequence.
ACCESSION BG084656
VERSION BG084656.1
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 599)
AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A.,
Tanaka,T.S., Carter,M.G. and Ko,M.S.H.
TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set
JOURNAL Unpublished
COMMENT Other_ESTs: H3103E02-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3103 row: E column: 02
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..599
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3103E02-5"
/db_xref="taxon:10090"
/clone="H3103E02"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 224 a 107 c 120 g 148 t
ORIGIN
1 taggttttga aaaaatataa gcctaaataa agaagttaac cacacccaag aaaacacaag
61 gaataaataa ccccagaaga gtaaatcaaa agagtagaaa aaaaaaaccg cacacaataa
121 caacaaaata acaggactca ataaatattg cacattgata actcttaata ttaatggtct
181 caattcccca ataagaagat atgggctaat atagaaaaca ggatccatct tttggctgca
241 tacaagaaac acgccttacc ttcaagatgg atactatccc agggtaaaaa gatgaataaa
301 catattccaa gcaaatggct ctgtagtggt tattcctggt tgtcaacttg actatatttg
361 gaatgaacta caatccagaa ttggaaggct caccagtgac ccttatctgg aggcttggag
421 atagaagttt ctgatctgga tcttggtatg gagatcttga ggcatagtgg ctatggattc
481 cagaagatta aatctccgag ttcaaggtca cctgggatta aaggtatggt ggaacacacc
541 tttaatctgg gctactcctt ctgctggaga caatataagg acattggaag aagggagtc
//