LOCUS BG084579 608 bp mRNA linear EST 12-MAY-2010 DEFINITION H3102E12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3102E12 5', mRNA sequence. ACCESSION BG084579 VERSION BG084579.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 608) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084579.1. Other_ESTs: H3102E12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3102 row: E column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..608 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3102E12-5" /db_xref="taxon:10090" /clone="H3102E12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 146 a 165 c 180 g 117 t ORIGIN 1 ggaaggcggt catagagcca tcttttttaa tcgtattggt ggcgtgcagc aggacacgat 61 cctggccgaa ggccttcact tcaggatccc ctggttccag taccccatca tctatgacat 121 tcgggccaga cctcgaaaaa tctcctcccc cacaggctcc aaagacctgc agatggtgaa 181 catctccctg cgtgtgctgt cccgacccaa tgcccaggag ctccccagca tgtaccagcg 241 tctagggctg gactatgagg agcgagtgct gccgtccatt gttaatgagg tgctcaagag 301 tgtggtggcc aagttcaatg cctcgcagct gatcacccag cgggctcagg tgtccctgtt 361 gatccgaaga gagctgacag agcgcgccaa ggacttcagc ctcatcctgg atgatgtagc 421 tatcacagag ctgagcttca gccgagagta cacagctgct gtagaagcca agcaagtggc 481 ccagcaggaa gcccagcggg cccagttttt ggtggagaaa gcgaagcagg aacagcgaca 541 gaagattgtg caggctgagg gggaggcgga ggctgccaag atgcttggag aagcactgag 601 caagaatc //