LOCUS BG084465 597 bp mRNA linear EST 12-MAY-2010 DEFINITION H3101C03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3101C03 5', mRNA sequence. ACCESSION BG084465 VERSION BG084465.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 597) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084465.1. Other_ESTs: H3101C03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3101 row: C column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..597 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3101C03-5" /db_xref="taxon:10090" /clone="H3101C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 169 a 108 c 91 g 229 t ORIGIN 1 aagactttag cgggttttct tttcccattc attgtttttt atcagttcaa aaagattcct 61 taaagcatgt caggtgaaaa ccaataagga tgaaaagttt ccatataatt tcctttaaac 121 cattgagtct ttcattacat tctttccatt tactaatctt ttatattttc tttgttttgt 181 cacacccccc tttcctttta tctctgatat ctgccagaaa gttctcaaat catttagtta 241 aaatactgaa atactagtaa attacttgag tttttcacga tgacttcaga ggaggggtca 301 tcactaggtg ctttgtcctt tttgtactat gattcaccca tctcttggat tggatgtagc 361 aataacattt tctggctgtt gagagctctt gatcctagtc attatctcct gagaacttta 421 aaaataaaat gtaaaggctg ttctaagttc atcttagtga aatttattcc aaacaataca 481 aaaatccaga tttggttttt gcccttaagt tgtctaatat taaggttgga tgaatatagc 541 atgcgcagct acaggctttc tacatctggg attgctatta aaaatgctat ttgtcct //