LOCUS BG084408 668 bp mRNA linear EST 12-MAY-2010 DEFINITION H3100E08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3100E08 5', mRNA sequence. ACCESSION BG084408 VERSION BG084408.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 668) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084408.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3100 row: E column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..668 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3100E08-5" /db_xref="taxon:10090" /clone="H3100E08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 118 c 150 g 178 t ORIGIN 1 tatggtcatg gcggagggga cggcagtgct gaggcggaac aggccaggca ccaaggcgca 61 ggatttctat aattggcctg atgaatcatt tgatgaaatg gacagtacac ttgctgttca 121 gcagtatatt caacagaaca taagggcaga ctgctccaat attgacaaaa ttcttgaacc 181 acctgaaggc caagatgaag gtgtatggaa gtatgaacat ttaagagtga atgccatcca 241 gatacctgta ctcagatgac agcaactgaa caatggattt ttctttgtgc agctcataaa 301 actccaaaag agtgtcctgc catagattat acaagacaca cactggatgg tgctgcatgt 361 cttctgaata gcaataaata ttttcccagc agggttagca taaaagaatc atctgtagca 421 aaactaggat cagtgtgccg taggatttat agaatatttt cacatgccta ttttcatcac 481 cggcagatat ctgatgaata tgaaaatgaa acatttttat gtcatcggtt taccaaattt 541 gtgatgaaat ataatctgat gtcgaaggat aacctgattg taccaatttt agaagaggaa 601 gttcagaact cagtttctgg ggaaagtgaa gcatgaagga atcacgtaga acaatgtact 661 gatcacat //