LOCUS BG084272 667 bp mRNA linear EST 12-MAY-2010 DEFINITION H3098E05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3098E05 5', mRNA sequence. ACCESSION BG084272 VERSION BG084272.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 667) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG084272.1. Other_ESTs: H3098E05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3098 row: E column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..667 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3098E05-5" /db_xref="taxon:10090" /clone="H3098E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 235 a 115 c 142 g 175 t ORIGIN 1 ctctccccca acacttcctg actagacagc tattttatac ttattaaaat ggtgaggaat 61 agggctggag agatagctca gcgattaaga gcactgagtg ctcttctgaa ggtcctgagt 121 tcaaatccca gcaaccacat ggtggctcac aaccatctgt aatgagattt gatgccctct 181 tctggtgtgt ctgaagacag ctacagtgta cttagatata ataataaatc tttttatttt 241 ttaaaaaggt gagaaataat tagtattggt agggagaaaa aaagaaaaga tatgtgcagt 301 tgggtatgat gatgcaagcc cgtgagccta gcactgaaga agccaagtgg ccaagtcaag 361 agaatcataa ggttaaggct agcctgggct acacaatgag actttatctt aaaaaaaaaa 421 aattcagggc tggagagatg gctcagtggt taagagcact gatgtcctga gttcaaatcc 481 cacaaccaca tgatggctca caaccatccg tgatgggatc tgatgccctc ttctggtgtg 541 tctgaaaaca gctacagtat acttacatat aatagtaaat aaatcttaag gaaaaaattc 601 aaaatattgt aaaagcaaaa aagtatgctg aaatataatc aaaaatgtga aaggtagtca 661 ttaaaat //