LOCUS BG083904 587 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093E01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093E01 5', mRNA sequence. ACCESSION BG083904 VERSION BG083904.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 587) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083904.1. Other_ESTs: H3093E01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: E column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..587 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093E01-5" /db_xref="taxon:10090" /clone="H3093E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 149 a 103 c 150 g 185 t ORIGIN 1 aaagaattga ggcgtctctt cttagttgat gatttagttg attccctgaa gtttgcagtg 61 ttgatgtggg tatttactta cgttggtgcc ttgtccaatg gtttgacact actgatttta 121 gctctgatct cactcttcag tattcctgtt atatatgaac ggcatcaggc gcagatagat 181 cattatctag gacttgcaaa caagagcgtt aaggatgcca tggccaaaat ccaagcaaaa 241 atccctggat tgaagcgcaa agcagaatga aaaggcccca aacagtagac attcatcttt 301 aaaggggaca ctcccttggt tacggggtgg gcgggtcagg ggtgagccct gggtggccgt 361 gcagtttcag ttatttttag cagtgcactg tttgaggaaa aattacctgt cttgacttcc 421 tgtgtttatc atcttaagta ttgtaagctg ctgtgtatgg atctcattgt agtcatactt 481 gttttcccca gatgaggcac ttggtgaata aaggatgctg ggaaaactgt gtgttatatt 541 ctgttgcagg tagtctggct gtatttggaa agttgcaaag aaggtag //