LOCUS BG083903 631 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093D12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093D12 5', mRNA sequence. ACCESSION BG083903 VERSION BG083903.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 631) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083903.1. Other_ESTs: H3093D12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: D column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..631 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093D12-5" /db_xref="taxon:10090" /clone="H3093D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 126 c 139 g 167 t ORIGIN 1 gaaaagatcg atgggaattt gcttgttcaa ttaacagaag agatcctctc agaggatttc 61 aaactaagca aactacaggt aaagaaaata ctgcagttta ttaatggctg gaggcccaag 121 atatagccaa atggccccat ccgtcatgag acagagctaa gaagcgcgtg ctggaagggg 181 tgggctagga cacagattca tgtttttgca cttaaaacaa acaaaacaaa acaaaacctt 241 ctctgtatat agagataaga gaaagtctta ctatgcagat tccgtttccg aatggtgaac 301 aggctatttt gtacatcaat aaagatgcta tacagaacac ttagaggtgt gccttgtacg 361 tcactcaaca ttcaacagct gctaaaagaa ctaaagtcat atccagagaa ctcatttgta 421 cccctaatag gtcttggaga aggcatggta tttattacaa aacagccaaa gctgaaacac 481 ataaacactt gtgagcagtt cgcttcctgg ggagtcaacg gtggacagtc cattgtattc 541 tgcagctcgc tttgcttcct gccagctgtt ttcctcctgt gcctggtgat gtgagtggtg 601 tgaaatgaca ctttaatgtt ccatgcttgg t //