LOCUS BG083712 624 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091C05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091C05 5', mRNA sequence. ACCESSION BG083712 VERSION BG083712.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 624) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083712.1. Other_ESTs: H3091C05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: C column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..624 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091C05-5" /db_xref="taxon:10090" /clone="H3091C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 185 a 152 c 136 g 151 t ORIGIN 1 ggagcctgca agctgctata tctgaaaaca ctgcgtccaa taatcacttc caagagccca 61 aactcaaaga catccttctg cagatttcct tgggacttaa gtacatccac aattctggca 121 tggtacacct ggacttttaa cccagtaaca tcttcatttg tcataagatg cagtgtgact 181 ctcctgtagg cccagaagag gctgaaagtg aagctgactg ggttctcaat gccagtgtga 241 tgtataaaat tggtgacctg ggccacgcga catcaatcag caaacctaaa gtggaagaag 301 gagatactcg tttcctggct aatgagatct tgcaagagaa ttaccaacac ctccccaaag 361 cagacatatt tgccttagga ttaacaatcg cagtggctgc aggagcagag tctttaccca 421 tcaatggtga catgtggcat catatccgca aagggaactt tccagagatt tcccaagagc 481 tctcggatga cttttatggt ctactcaaga acatgatcca cccagctcca aaggagagac 541 catctgcagc agctctggcc agaagtcgaa ttctctggcc tttcttggag aagactgatg 601 aactccagaa acaactgaat ttgg //