LOCUS BG083668 596 bp mRNA linear EST 26-JAN-2001 DEFINITION H3090G07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3090G07 5', mRNA sequence. ACCESSION BG083668 VERSION BG083668.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 596) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3090G07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3090 row: G column: 07 Seq primer: -21M13 Reverse POLYA=Yes. FEATURES Location/Qualifiers source 1..596 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3090G07-5" /db_xref="taxon:10090" /clone="H3090G07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 181 a 132 c 105 g 178 t ORIGIN 1 tttttttttt ttttctctat aaaattaaga taatcaaaca ttaatatatg tattgacttg 61 tgatatattt taatatattt aaattagtgt ggagggatgg gggcacagct cagttgtggt 121 atgcttgcca acaagagcag ggctcaaatt tgagccccag catcataacc acaacacata 181 tgcatgcaca tagaaggggt tggagcaggg gagagctaac taacctcacc aaacccaaaa 241 ccaaccaacc aactaaccaa aacaccctca atgcttagca ggtagggagc actgtgaagt 301 taaatagcat tttacttttt cattatctac cctgcctccc atggccacct gttttttttc 361 aaatgctgaa tttcacatac ttggcagaat tacacctctt tctctctcat aaaattaagt 421 aggccccaat aaatgaatgg acgttttcac aggatgccct gtctgtttga tgaactgaat 481 tgattcactg ttctatgaaa cacaagcatt cagaccacat tacctaagca ttgtcgtctc 541 ttgcgaggcc acggtgtcag tcttactgat gaaaaattaa cctccaggct cctctg //