LOCUS BG083361 704 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087D08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087D08 5', mRNA sequence. ACCESSION BG083361 VERSION BG083361.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 704) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083361.1. Other_ESTs: H3087D08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: D column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..704 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087D08-5" /db_xref="taxon:10090" /clone="H3087D08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 203 a 184 c 162 g 155 t ORIGIN 1 gcgagaggcg cttcagagaa ggagggaccg acctgcagga gccggccgcc ccgccgagct 61 gcagtcgctg ccgccgccgc tgtcgctgtc gctgtcagaa cccgtccgaa gagtgacacc 121 ttcgcgaaaa aacaggagct gtgaaacatt tgcacacgca gtcttcggat cccaggtccc 181 cattcatgag cccgaggctg tgagacatgc tccatgtgcc aaggggagtt ctcaccacat 241 cttccgaggc tgtcctagac atacactctt cggtctgagt cagcattacc agacagtgct 301 gctgctacct cgagaaatcg ctggccatca gtgtccctgg aagtccctaa gaaagccttg 361 cagaatctgc agcttgttgg gaatctgaaa ctgccaataa aatcaatatt gtgcctggag 421 tagatgataa atctgaagaa aaagattact ccattgattc agagctaaac accgacactg 481 aactctgctg ttatagagca tatcatacag aaagcttatc caagagaagt cctatcatat 541 tcatcaacaa cgtcgaaagt agcctacttt aagagaaaat atgcagaaga agaagatcta 601 catcaagatt cccatgggta ttttccaaaa cacctgatat taccggaaga caggacttgt 661 atcctcaaac tttccctaga gaagctcagg tttcttgaag accc //