LOCUS BG083318 663 bp mRNA linear EST 12-MAY-2010 DEFINITION H3086H10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3086H10 5', mRNA sequence. ACCESSION BG083318 VERSION BG083318.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 663) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083318.1. Other_ESTs: H3086H10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3086 row: H column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..663 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3086H10-5" /db_xref="taxon:10090" /clone="H3086H10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 137 c 120 g 207 t ORIGIN 1 aaaagacaaa aacctctata actacagagt atctgctagc tctctttact ggtatcctca 61 cagattatga caagacaaga catcacagga ggactttctt agtctctgtg tgcttctgag 121 aaaactagtg taagttttgt tgctgataca tgtgatcatc gttggcataa ggcaacctat 181 atactgagca gatttccaaa agctagtgtt agggagcagg tgatcactta attagaatca 241 tgtgtccatg acaaacttta ttccattctt caaatggaaa gagggaaaac catgtaagta 301 tatttagaca attatcaacc tgtgaatttg tagtaagaat agaaatatga ctcctttgca 361 gtgcctactt tctttctgag tcctcggtgt tttgaggacc tcttctttct tctacaacca 421 ttctccttat gacgtagcat ccaaaccagg ttcattaacc catttagcag cagtttgtac 481 aaaagaataa aataataaat attatctgtc ttagggtgtc ttctctagac aaaggcttca 541 ccttattttc tcaagcaagc actttccagc cacttatcag gagcactctc caaagccagt 601 ggcttggaca cacagctctc cttgaatact agctctggta tttacatagt actgtgtgtg 661 gga //