LOCUS BG083211 648 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085G05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085G05 5', mRNA sequence. ACCESSION BG083211 VERSION BG083211.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 648) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083211.1. Other_ESTs: H3085G05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: G column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..648 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085G05-5" /db_xref="taxon:10090" /clone="H3085G05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 131 c 151 g 146 t ORIGIN 1 cacgctctgg tgtgcttact tgaagcaaat gggtttacca ttcaacaagc agaaatcatt 61 gtgtctgcac tggtcaagat cacagagacc aacatgaaca tcatctacaa agacatggtc 121 agcaagatgc agcaggaaat cgctctccag caggtattat ctaagattgc taacgtgaaa 181 aaagatatgg tcatcttgga gaagagtgag ttttcagccc tcagagcaga aaatgagaaa 241 ataaaacttg aactgcacca gttaaagcaa caagtgatgg atgaagtgac caaagtccgg 301 acagatacca aattaaactt caatctagaa aaaagcagag taaaagaact gtactcgctg 361 aacgagaaga agatgctgga actgaggact gaaatagtgt cgctgcatgc ccagcaagac 421 agagccctga ctcagacaga ccggaagata gagacggagg tggctggcct caagacgatg 481 ctggaggcgc acaagcttga tacaatcaaa tacttagcgg ggtctgtgtt tacgtgccta 541 acagtggctc tgggatttta tcgcctgtgg atataataaa gtgtctattt aaagacattt 601 tcattgtttt gccataagag taccagattg ttataccacc cacccaac //