LOCUS BG083204 752 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085F10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085F10 5', mRNA sequence. ACCESSION BG083204 VERSION BG083204.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 752) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083204.1. Other_ESTs: H3085F10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: F column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..752 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085F10-5" /db_xref="taxon:10090" /clone="H3085F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 226 a 157 c 143 g 226 t ORIGIN 1 ggagcttggc cctgaaactg acaaaggaag gatctaccaa aagaagttag cacctaacct 61 ttcttacccc accagcgaac gtaaacgaca ttgaaaaggg actgcaagtg agcagtcttt 121 ctcgactaac gctaaatgaa ctgtgctaaa atactgcgta tattcgaagt tgataactgt 181 ggaaaacttc ccttttcttt tgttacctat attgtgcaaa ataatgtgtt ttgttgtgac 241 atcttcgtgc agataacgtt agttaacaca tcatcccctt cccttaacca cttggtaccc 301 ttaccgatga aaatacattc agaatactta aagaactttt gagcctattt gctcagcatc 361 tcaacacctt ttctccagta actcaaacag tactgtgtgt ttgtttttca ggttctgaag 421 ttcactatag aaagatgcca aaagacctac tgagggtctc tgaaaagtta aaaatgctga 481 tatgcgtaat ttgagtgttt tatttttccc ctcctgagct tttcgaagga gatggctagc 541 tcggtggtga ggattcccac agcacagtca agaccctgga ttgtatccct agcactggtc 601 tgtttgcatc agtgaaaata tatacggtgc ctctgttaga aattaataaa gttccagtag 661 gtcttccttt caaaaagcta ggcaggctgc tttttaaatt tccaaaacac aacaggaacc 721 ttcaaagata tatggagatg atggtactta aa //