LOCUS BG083183 652 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085D11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085D11 5', mRNA sequence. ACCESSION BG083183 VERSION BG083183.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 652) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083183.1. Other_ESTs: H3085D11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: D column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..652 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085D11-5" /db_xref="taxon:10090" /clone="H3085D11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 164 a 126 c 157 g 205 t ORIGIN 1 attctccctt gagtgtgcat ggtaggaagg gcccctgagg ttgacaagct tgctctgagg 61 ctacaaagcc tgacaccagg atttcagtct caggagccta agaagtggaa gaacagaatg 121 gattccagtt tcctctggcc tcctcacatg tacatgcatg catccataca agataaataa 181 taaagaagtt acagaggaaa gctgtgtgtt cattattttc tcgttgctgt ggtttaagtg 241 tacaatctgt acagccacag tggcaaggat gtgaggaaac tggtggaatt gcatctcgtc 301 agcaaacagg tgaacagttg gtgctctctt tcccactctt tttaaacttt attattttgt 361 ttgttttgag acagggtcta ggaagtagtt atgtagacca ggctgttctt gaactcacag 421 agatccacct gctactgctg cctcctgagt gctaagaatt ttatttatta ttgaatgtct 481 gtgacaggtg gtatatatct gagcaggtat gtatggaggt cagggaacat ctttgtggac 541 ttggttctca ttaactttct gtagcttctg agaatggaac tcatgttctc aggcttgagt 601 cttcaggcaa caaacatttt tgcttgtgga acctgagcca gcttgctgtc tt //