LOCUS BG082927 667 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082D12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082D12 5', mRNA sequence. ACCESSION BG082927 VERSION BG082927.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 667) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG082927.1. Other_ESTs: H3082D12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: D column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..667 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082D12-5" /db_xref="taxon:10090" /clone="H3082D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 193 a 121 c 110 g 243 t ORIGIN 1 atttgatttc tagcacatgt gatgttcact tccatatttt gcactgctta tatttacgtg 61 caatcttatt ccttgtccgc acacagatgt ggaaagctag aaataaatgt aaaagcttaa 121 ttttttataa acatttaaat atgtaatttg gacatgattt gttacttaag gttctttaaa 181 ctggaagtga agtgcatgcc ttctgaagat gttctggctt tattctgtaa taagtattta 241 cattggaaaa taccaatttc gctatacagt tttttttcca cacacccatt ttaccttttg 301 cttaaattgt gggttcttca gggttaatgt cacgctaatt aataaaactt ttgggttcaa 361 atcaagtgtt cccacaaggg taagaacagt attctttgac tcttaaaaag tcctttctga 421 gacctgtact caaaacagct ttattaggcc tgtgtcgtga aagccagata tgacaaacat 481 ttttacaaag cagtggatct ctagttggct ttcaaattcc tcccatctac cacctttggt 541 atttacagag atgacgtcct taaaccattg tcagaattaa tgggtatgtc cagttctctt 601 tatctttgac ttgatgcttt atacaacatt tcatatgtcg cttctaagga aataagccat 661 agaggct //