LOCUS BG082922 656 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082D04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082D04 5', mRNA sequence. ACCESSION BG082922 VERSION BG082922.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 656) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG082922.1. Other_ESTs: H3082D04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: D column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..656 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082D04-5" /db_xref="taxon:10090" /clone="H3082D04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 157 a 140 c 167 g 192 t ORIGIN 1 gaacagaagt cccagcagcc cctgctgtgg ttggcagctt ccttcctctc ctgcaggaga 61 attcataact agcaacctca gggaatgaag ggctatagtc aacttagact ataaaaatcc 121 taagcctgag aggactgaag agaagatggg gtagcgctct ctgggataca ctcacagtga 181 gatgtcttct cttctggttt tgtggatggg cactttctgt tcctctgatc tttcagggga 241 agccgtaggg ccatctctga gggtggagta tgtagttata tcaccttcga agaaggtgct 301 gggcctgggt gggtactgcc ctcttctgga agtgaaagcc tcgctgacca gcttgctggt 361 tctaggtagg ctttttgaac attcccagca gggcatagca acatcttaga cagtctcttt 421 gtgctcctga acttgtgcgt ttgtcattgt ttgtagagca aagagaaaag gggatctaac 481 acgagtcaac tttatttgtt gactttgcac ctgactttgt tctgcgaatc tggaagaaac 541 atgtcttttc cttttcaggc tgtctcttct tacatgaatc agttggtaaa cagagcctaa 601 gagaaaaagg cgtgttcagt acttatctcc catgttaaga ggttggcatt tcagca //