LOCUS BG082893 630 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082A04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082A04 5', mRNA sequence. ACCESSION BG082893 VERSION BG082893.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 630) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG082893.1. Other_ESTs: H3082A04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: A column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..630 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082A04-5" /db_xref="taxon:10090" /clone="H3082A04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 192 a 147 c 141 g 150 t ORIGIN 1 tgcaggggaa agaagaaaaa aaaaaaccaa tgtatgtagt taggaaagct cagctgtttt 61 aactgccact gactatgggg ccattgtgtg cgctgaaatt attcattaaa tagtaacact 121 ggaaagtaag cagtggccat catcgggcaa acttcagaag agagcgaagg gacccctctg 181 tgtctgtagt gatgggcaaa cttctgaggg ctgctctgaa accagagtct gagctaacca 241 gacttcagtc tctactgccc ctctcagtac ctaagaccca aacatcagca ccctccccat 301 gtgagtcact aggcccgtta gagaaaatag gaggatatat tttatttatt ttatttatta 361 aaatatgaac cctctgggct ggatagatag ctcaatgatt aaagtgcttg ctttaagcat 421 gaaaacctga gtctggatcc ccagcaccca tctagggaaa aaagtcctga cagcttacct 481 ttataatccc agagcagagg aggcagagac aggaggattc atcacacctt ccttctgtga 541 gctcagagac aactgacatg aagccagcct ttcaacttca gcaagaatga gcagcaaggt 601 gccctgctct gccaccagct cctgtagctc //