LOCUS BG082577 583 bp mRNA linear EST 12-MAY-2010
DEFINITION H3077F11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3077F11 5', mRNA sequence.
ACCESSION BG082577
VERSION BG082577.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 583)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG082577.1.
Other_ESTs: H3077F11-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3077 row: F column: 11
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..583
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3077F11-5"
/db_xref="taxon:10090"
/clone="H3077F11"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 156 a 157 c 98 g 172 t
ORIGIN
1 tctacatgaa attattcaca gcaggttgct cctgtaaaag tcactgccct tccttaacaa
61 ctagctcaca tttcttgtcc tggatacaag ccttaattaa tttccataac ggccttgttc
121 ctgctttcac tttcccgtct gcttcctctc tcgctatttc tttttccaac ttttcccaac
181 taggtagcgt cagcgaccca gtgggagtga gtctgtctat ctcttctaaa aacccactcg
241 ctgtgctttc tgaaaatttc aaaccccgtt ctttgagcaa ggcttgcacc ggccctacta
301 atgtcataga ctggccagta cccatgatcg tcctggacta aagcgttatc tacatgaaat
361 tattcacagc agatacactc gtgcccaggg cgatgacaat taaggcaatg gcataatatc
421 aaggcaagaa agaaagtaag cagcataacc ccagcgacaa ttatcggatc tattccatag
481 gaaagcatac ctctcagaga cctatattaa tttctttata cttactggta ccaccgttcc
541 ccagctgaag agttctgaat tcacgcagtt gaatctttct cac
//