LOCUS BG082234 595 bp mRNA linear EST 12-MAY-2010 DEFINITION H3074A01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3074A01 5', mRNA sequence. ACCESSION BG082234 VERSION BG082234.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 595) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG082234.1. Other_ESTs: H3074A01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3074 row: A column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..595 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3074A01-5" /db_xref="taxon:10090" /clone="H3074A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 151 a 148 c 180 g 116 t ORIGIN 1 cggcaatcca ctacaacatt cccgagctgc agtcctccag cagggtcccc ttgccccagc 61 acaatggaca acaggagcct ccaatgggga ggaagggccc tcctatgcag gaggcggacc 121 aggactctga ggaggactct gaggaggaca gcgaggagga agctgaggaa gccccgaggc 181 gccagtggca agggattgag gcaatctttg aagcttacca ggaacacata gaagagcaaa 241 acctggagcg gcaggtgctg cagacgcagt gccggcggtt ggaggcgcag aactacagcc 301 tcagcctgac tgcggagcag ctgtctcaca gcatggcgga gcttcggagt cagaaacaga 361 agatggtctc tgagcgggag cggctccagg cggagctgga ccacttgcgg aagtgccttg 421 ccttgcccac catgcactgg cctaggggct actttaaggg atatccgagg tgacggtttc 481 ccttgcacta ggctgaacct atagtataga aatattatct attttattac cttgaatatt 541 taatattttt cactgggagg tttgaagctt acaaattgag aacgtgccat gcatg //