LOCUS BG082172 604 bp mRNA linear EST 12-MAY-2010 DEFINITION H3073C07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3073C07 5', mRNA sequence. ACCESSION BG082172 VERSION BG082172.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 604) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG082172.1. Other_ESTs: H3073C07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3073 row: C column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..604 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3073C07-5" /db_xref="taxon:10090" /clone="H3073C07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 155 a 121 c 154 g 174 t ORIGIN 1 tgaagatgag gtgtttgttc ttgagccaca cccatttgat cctagagttc tcttctctgc 61 tggtcatgat ggaaatgtga tagtgtggga tctagcaaga ggagtcaaag ttcgatctta 121 tttcaatatg attgaaggac aaggacatgg tgcagtgttt gactgcaaat gctcccctga 181 tggtcagcac tttgcatgta cagactctca tggacatctt ttaatttttg gttttgggtc 241 cagtagcaag tatgacaaga tagcagatca gatgtttttt cacagtgatt atcggcctct 301 tatccgtgat gcgaacaatt ttgtattaga tgagcagacg cagcaggcac ctcacctcat 361 gcctccccct tttctggttg atgttgatgg aaatcctcat ccatcaaggt accagcgatt 421 ggttcctggt cgggagaact gcagggagga gcagctcatt cctcagatgg gagtaacttc 481 ttcaggattg aaccaagttt tgagccagca agcaaaccag gatattagtc ctttagacag 541 catgattcaa agactgcagc aggagcagga cctgaggcgt tcgggtgaag caggtgttag 601 taat //