LOCUS BG081926 638 bp mRNA linear EST 12-MAY-2010 DEFINITION H3070E08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3070E08 5', mRNA sequence. ACCESSION BG081926 VERSION BG081926.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 638) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081926.1. Other_ESTs: H3070E08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3070 row: E column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..638 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3070E08-5" /db_xref="taxon:10090" /clone="H3070E08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 234 a 103 c 138 g 163 t ORIGIN 1 gataaaagtc acatttgaaa tattaaataa aatacaaatt attgaataaa tactgatggg 61 aaaattaatt ccccattaat aaaaatgctt tataagaaaa aataaaacaa atggatttgg 121 atttaataac aaggagacac ttacacaggc acaggcacag acagacacac aagaatgaaa 181 acaaagaatg agaaaattag ttagattatt tttgaggggg accctgcagg tgtccaggca 241 ggaaagagaa tgtcaaagag ggaggaatga aaaatctgtt aacctggatc aaggcgtcta 301 aatattctca tttcaggcag tttactcctg acaaatttaa acacagtata atttggggag 361 aaattctcct ggtgtaatac aagccccaat gttcaaggaa gcataattac atcgaacctc 421 aactcagtgt atgtgtcatt tcttcctgga agatagagat gggttcttag agataggata 481 cctgtactag cttaagcacc cagggaaagc tctggcgtgg tctcagatat agagagagca 541 tagaggtcat ttaggctgct agccagctct ggtctggttg taagagcttg gggaagcctc 601 ggctatacag ataatataac tgtcatccag actattag //