LOCUS BG081852 638 bp mRNA linear EST 26-JAN-2001 DEFINITION H3069G04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3069G04 5', mRNA sequence. ACCESSION BG081852 VERSION BG081852.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 638) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3069G04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3069 row: G column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..638 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3069G04-5" /db_xref="taxon:10090" /clone="H3069G04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 282 a 139 c 90 g 127 t ORIGIN 1 agattcataa taaccaaaac actaaaggta caaagcaaag aaagaataaa taaaagccac 61 aagacaaaaa ggccaagtaa catatatagg cagacatcaa attatacctg acttctcaac 121 agagactcta aaagccatat tggcttggat agatgccttg caggcctacc ctaagggacc 181 acagatgtca tcccagacta ctatatccca gcaaaacttt gaatcacaat atatagagaa 241 accaaggata ttccatgtca aaaccaaatt taaagagtat ctttctacta atccagccct 301 aaagaagata ctagaaggaa aactccaact taaaaagtgt aactacactc aagaaaatac 361 aagaaattaa tcatatcaca gcaaagccaa aagaagagaa acatgcacac acacacagta 421 acacttccaa cattaaaaaa acagaaacta acaatcattg gtcatttaat atctcatatc 481 tctcatcatc aatggactca atacaccaat aaaaagacac aggttaacgg actggatgca 541 taaacaggat ccatcattct gcagcataca agaaacatac ctcagcaaca aaaatagata 601 ctaccttaga gtaaagggct taaaaaaagg gcggccgc //