LOCUS BG081746 675 bp mRNA linear EST 12-MAY-2010 DEFINITION H3068F03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3068F03 5', mRNA sequence. ACCESSION BG081746 VERSION BG081746.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 675) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081746.1. Other_ESTs: H3068F03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3068 row: F column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3068F03-5" /db_xref="taxon:10090" /clone="H3068F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 254 a 128 c 108 g 185 t ORIGIN 1 gtaactttag agctcttcaa gaaacctaga aaacacaaga aatctggctt tcacaaagaa 61 aaattgtgct acactgttca cataaataaa tggaaataat cttataataa aatgaaaata 121 tttaaaagta gcgataaaca gggttctatg attgtttcct ggtagtagat agtaactagt 181 atgattgatc aaactgtatc aacacatact ggcaaggaca aatgaagata aaactttaag 241 agttaccccg accaagttct tttaatcaaa tcagtgtctg agaaacataa ccaaccatgt 301 tttcaatttt gggaaattac caacatcagc ttgagtaata tggcacactt accagggtat 361 gttcataaac atagttatca ataacatttc caaggtttgt tccttcatcc aacaggccaa 421 cggagtagtt cgcatcgtca ataaatcctt tcatctcagc cgtattccac aaagccgaaa 481 gtcataaacc aggaaaaaca agagacgggc caccaagcct atgcctgggt ccttagaata 541 tgcaacaaac tgtcaaaaca gaagttcaat caaactcagc attatttcag taattaaaac 601 atggatatat tgagtgaatc actaaaattg tcaagtattc aattctgtgc ggaatttatg 661 tgatcactca acact //