LOCUS BG081654 583 bp mRNA linear EST 12-MAY-2010 DEFINITION H3067F02-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3067F02 5', mRNA sequence. ACCESSION BG081654 VERSION BG081654.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 583) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081654.1. Other_ESTs: H3067F02-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3067 row: F column: 02 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..583 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3067F02-5" /db_xref="taxon:10090" /clone="H3067F02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 218 a 90 c 126 g 149 t ORIGIN 1 ctgctgaaag aattgcagta aaaacaatgc aataaaaact ccacagagcc aaaactagat 61 caaatttatc gaataagctg ctatttaaag gagaaactgg ttatcggtaa gagtgtcact 121 cggagctggt caccaggaac cactctgagg aagactgtca gaaaaggctg gttggacaag 181 gctgaggtgg ccaaaccaaa tgtgagatgc tcacagctag atgtaggtta atattaggtg 241 aagatgtagg ttaataaaat gaaggccaac aagatttaaa atgctcaaaa tatttattac 301 tttgaaattt gaagaattta aaatgtcagc tcatagcaaa aatctagagt gttgaagata 361 ttgatgataa tattattaga gcatagatta taccctttta tgagtaagat tgctaataga 421 ggaaatagtg aaataaatgg gttatccaga atttttcctc cttcttttcc atatctaatt 481 tccattattc taccccttcc cacctgaaag agacagagac agagagagag agagagagag 541 agagagagag agagagagag aaatcaacag agcctcctgt ctc //