LOCUS BG081291 585 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063D10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063D10 5', mRNA sequence. ACCESSION BG081291 VERSION BG081291.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 585) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081291.1. Other_ESTs: H3063D10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: D column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..585 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063D10-5" /db_xref="taxon:10090" /clone="H3063D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 175 a 90 c 101 g 219 t ORIGIN 1 atccccctca cagtgttgat agcgtgtaag ctttgcaaaa cactgctgtc tagccaaaac 61 atcaggctgg aactcagcgt tggaatacgc aaacatataa gttgcttatg aaggatgtgc 121 ttaaaatatt agcaacgttt atttcaaagc catccaagaa attaggattt gcaaatgaag 181 tgtagcacat gataattttt aaatattact tttctggcaa agcattcgat tctttcattt 241 taaatttgaa ttattcatca ggcatgatta ttttggctgt agtaaaaata ttttttgaga 301 tagatatttg gtggccttat ttgttctata tctacttgtc ttaatgatga ggtactgagt 361 ttgtttcttt gctgtgtttt ttaattgtgt ttagaaatac tgtattaaac acatagcact 421 aatataaaat gagaatctta taaaagatga tataaaaatt cgtatctgtg cctcactttg 481 cattaagttc tatcttgtac tctcctgtcc gtatactgtt tcagtagacg ctgatatttc 541 actcttctga agacttgaag tggtcattgt agcatttctg ataat //