LOCUS BG081237 622 bp mRNA linear EST 12-MAY-2010 DEFINITION H3062H01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3062H01 5', mRNA sequence. ACCESSION BG081237 VERSION BG081237.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 622) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG081237.1. Other_ESTs: H3062H01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3062 row: H column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..622 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3062H01-5" /db_xref="taxon:10090" /clone="H3062H01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 234 a 107 c 90 g 191 t ORIGIN 1 gttcacaccg atcttacatg caagattaca ctgaagggaa tttagacaaa agatgatttt 61 agctctgaaa gccctcattt ttaaagtacc tgggatctcg aaaaaccaaa ccaaaataaa 121 aataaaaaat aaagtgcccg gaagtggagc tcaaggggca gaaggcttac gtggccctag 181 gttcaatccc caggcccaca gcaaataagt aatcttttct tttcagtact aaggactcag 241 gtacactagg gaaacattac tgagctacgt cgctagcttt aaactaatta aagactttgg 301 caaaaatttc atgcacttgt gtgtggaaac agaagctatc agatataact tcttcagaca 361 aatgcctttg ctaaatttct taaaacttaa gatttataat aatcattatt ttgctatcaa 421 tatgtatata tatatatgta tatatatata tatatacaca cacacatata tatatatata 481 tacatataga gagattataa atgcataaag atttcccctt tctccaacaa acagattctt 541 tcaggaaaaa caatatagtt tatcatggac aatttaatat tttcaacttt atgtttatta 601 tctgaaataa caattataga gc //