LOCUS BG080859 651 bp mRNA linear EST 12-MAY-2010 DEFINITION H3058B11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058B11 5', mRNA sequence. ACCESSION BG080859 VERSION BG080859.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 651) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080859.1. Other_ESTs: H3058B11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3058 row: B column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..651 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058B11-5" /db_xref="taxon:10090" /clone="H3058B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 88 a 80 c 238 g 245 t ORIGIN 1 ggtgtctgtg tgggtgtgct gtaggtgtct gtgtaggtgt gggtgtgctg taggtgtctg 61 tgtgggtgtg ctaggtgtct gtataggtgt gggtgtgctg tagatgtctg tgtaggtatg 121 ggtgtgctgt agatctttgt aggtgtaggt atgctgtagg tatctgggtg tgggtatgct 181 gtagatgtct gtgtaggtgt ggatatgctg taggtatctg ggtgtgctgt aggtgtctgt 241 gtgggtgtgg gtgtgctgtg ggtgtctgtg tgggtgtgct gtaggtgtct gtaggtgtgg 301 gtatgctgca ggtgtgggtg tgctgtagat ctctataggt gtgggtgtgc tgtaggggtc 361 tgtgtgggta taggtgtggg tgtgctgtag attctgtgta actggttctt tgctgtttct 421 ctgggtgttt taaggtgtct gcttttgtcc aggtgactgt ggtaatgtga gtttgcatca 481 tcatcatagc tccaatgtga ctctcctgtc tcctgtcctc atggatcact cagtaactgc 541 tggggatgtt ctgaatcatg tggcctgtgg ccgtgctgga gagtcaggtt gaacgcaggc 601 attctattga acagtattta tttttctaca acatgttaat agaatttttt t //