LOCUS BG080841 691 bp mRNA linear EST 12-MAY-2010 DEFINITION H3058B04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3058B04 5', mRNA sequence. ACCESSION BG080841 VERSION BG080841.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 691) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080841.1. Other_ESTs: H3058B04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3058 row: B column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..691 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3058B04-5" /db_xref="taxon:10090" /clone="H3058B04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 134 a 210 c 151 g 196 t ORIGIN 1 ggcaggtctc aatggtgctg tgagttgtct gaagctttgc tccatgtctg tcatagccct 61 ttttttcttg tccctgagct tgatgctgtc caacactcat aatacagtcc ccattctgcc 121 atcaccccct aaacttttcc actagccacc cacttgtcct ttgttgcact tacttggggt 181 tatcaaaagc tcttcagagg agctggaact ctgcccctcc cccccccccc gaaatgccca 241 tatcattgct acccaggcat attctaagac aggcatcatt aatactcccc acccattgct 301 gcccaccaac tgcccttttc catttgtcct ctttctgcct gagcagggct tttctagaat 361 ttgtgtcctc agaaggagca gcatgtttct ccaggtgggg gaaacagaag actggttgaa 421 tccccacctg cctctctaag ccaggctttt ctgggctctg gtttagcatg gccctctgag 481 cccaggcctg tgtataacct agcagctcac tgacctggtg ccttttaagg ggagtcctga 541 ttgaaaacct accctctgcc tgcagccttg gaagtgtgtg tgcatgtgcc tctgtgtgtc 601 tggctaagtg tgctgcacat atgtgcaggg aaggagggga gcatgatggc tcccactcct 661 catcgccctt cttcaagccc catcaagctg c //