LOCUS BG080326 643 bp mRNA linear EST 12-MAY-2010 DEFINITION H3052C10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3052C10 5', mRNA sequence. ACCESSION BG080326 VERSION BG080326.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 643) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080326.1. Other_ESTs: H3052C10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3052 row: C column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..643 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3052C10-5" /db_xref="taxon:10090" /clone="H3052C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 204 a 130 c 189 g 120 t ORIGIN 1 agcggagctg gcggccggct ccgggcccgt cgcgggaggc agttatgggc gccgtcgccc 61 cggattgtaa ctttgtgtca gcgtgcagtc cataaagtgc cagcatgggg aagaaacgga 121 ccaaggggag aagtgctcca gacacggtgg cctcagagtc tgcagaacca gtgtgcagac 181 accttagaaa agggttggaa caaggtaatt tgaaaaaagc tttagtaaat gtggagtgga 241 atatctgcca agactgtaag actgacaata aagtgaaaga taaacctgag gaggaagcag 301 aagacccttc ggtttggccc tgtcttaaat gtggccatca gggctgtggc agagattctc 361 aggagcagca tgccttgaag cactacacga caccgagatc cgagcctcac tacctggtgc 421 tcagtctgga caactggagc gtctggtgct acaagtgtga cgaggaagtc aagtactgta 481 gctcaaaccg attgggccaa gtggttgatt atgttagaaa acaagctggc gtaagaactt 541 caaaaccagc agagaaaaat aatggacaca ttgagctcga aaataaaaaa ttggagaaag 601 agagtaaaaa tgaacaagag agagagaaat cggaaaacct ggc //