LOCUS BG080189 632 bp mRNA linear EST 26-JAN-2001 DEFINITION H3050G07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050G07 5', mRNA sequence. ACCESSION BG080189 VERSION BG080189.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 632) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3050G07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: G column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..632 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050G07-5" /db_xref="taxon:10090" /clone="H3050G07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 274 a 126 c 94 g 138 t ORIGIN 1 tacttaaagg acccatagaa ctccaacagg aagcacttag acctaataaa cactttcagc 61 aaagtggcaa gatacagaaa cagcattaaa acaaacaaac aaacaaacaa acaaacaaaa 121 acagttgcct cagtctagac caattacagc ttgctaagga aaactccctt cacagtagct 181 tcaatataac aaaacaccca agaataaaag tcctaagcat aaaggttgaa ggaagttagg 241 aaagaagtga aagaagacac aagacctctc atgtccatga atcggcagct gttgttgtaa 301 aggtggttgt attattgaaa atgatctcca gattgcacat aatccccaac aaaatttcaa 361 ctgtattctt cataaaacaa gaagatataa aatgaaaatg atcttcagat tgcacacaat 421 ccccaacaaa atttctattt cattcctcgt aaaactagaa catataattc taaatgcaca 481 caggaaaaaa aaaaaaacaa taaggggaag tacccaaatg ctaatcgcaa attgtattaa 541 agagctgtag tcacaaaaat gtagtgatac tggcacaaaa acaaacatgt agactgctct 601 ctgttgctga actcaaacac tgaacaaaac ta //