LOCUS BG080151 644 bp mRNA linear EST 12-MAY-2010 DEFINITION H3050C10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050C10 5', mRNA sequence. ACCESSION BG080151 VERSION BG080151.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 644) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080151.1. Other_ESTs: H3050C10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: C column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..644 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050C10-5" /db_xref="taxon:10090" /clone="H3050C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 267 a 86 c 139 g 152 t ORIGIN 1 ataaaattaa cacagtcaag tacaatcaca tcagagtaaa tttctgtgca tctattatac 61 aactcacaga aggaatagaa aaaattcaaa ttatgtagtg aaaatggtta atatccagaa 121 tatatgaaga actcctgtaa ttcaaaaata gtagtccaaa caagtaattg gtcatggatt 181 tgaatatatt gttctcaaaa agttcatatt atcaataagc acatggtttg gttcaaaaca 241 ccaaaccatt aagaaacaaa tcaataccca tattagatac ggtaacctcc tactgcaata 301 gtaactatga agggggggga aggaaggggg aaggaaagaa ggaaggatgg aaggaaggaa 361 aggaaggaag gaagaaagaa aggaaaggaa ggaaggaagg gaaataatag caagggtaag 421 ggcttgttaa ggacgtgaag aaattggaag ctccacatag agctagtagg caagataata 481 atgcaatagc tgcagaaaac tatgggggat gttcctcaga aatttaaaat agaactacca 541 tatgattcag cagttttgac ttgaggtatt tacccaaaat aactgaaagc aggatatata 601 atgggtttct atgtgtattt atacaagcca tcatcactac aaca //