LOCUS BG080126 650 bp mRNA linear EST 12-MAY-2010 DEFINITION H3050A07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3050A07 5', mRNA sequence. ACCESSION BG080126 VERSION BG080126.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 650) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG080126.1. Other_ESTs: H3050A07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3050 row: A column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..650 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3050A07-5" /db_xref="taxon:10090" /clone="H3050A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 178 a 137 c 132 g 203 t ORIGIN 1 agacagggtt tctctgcata gctctaattg tctttgaact agctctgcag accagcctgg 61 ccttgaactc agagatctgc ccacttatct ttgcctcctg aatgctggga ccaaaggtgg 121 cataccacca cacctggcat atatattgtt tatttctatt tctattttta ttggtgccag 181 agcaaaccta ggacttagaa catgctgggc accaactcaa cttctgagct ctatttacaa 241 cttggtgtgt tagtgtattt gtcttagttc tgaatttgtc ctttttttag tgttaactct 301 aggctttgga gacagtgagg tgcatatact ctctccttcc caagaataag tgcttgaaca 361 cccttaccca cgcccaccca cccatgctag tcttttttct tagaagcgtg ggtcttggta 421 tacactgtgt cattttgagg ggtgaggttt aaaagtatat acaaagtata acgatatggt 481 ggctactctc gaggatgaga cagaaggacc aggagtttga gggtagctca gatatgcaat 541 aagttcaagg ccaacctgta ctatgtttaa atagtaagac agcatctcga taaaataata 601 aaactaaagt ctcaacaaaa taaaagcttt cacctattaa ggtgcttgct //