LOCUS BG079444 688 bp mRNA linear EST 12-MAY-2010
DEFINITION H3039H03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3039H03 5', mRNA sequence.
ACCESSION BG079444
VERSION BG079444.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 688)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG079444.1.
Other_ESTs: H3039H03-3
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3039 row: H column: 03
Seq primer: -21M13 Reverse
POLYA=No.
FEATURES Location/Qualifiers
source 1..688
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3039H03-5"
/db_xref="taxon:10090"
/clone="H3039H03"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 175 a 170 c 137 g 206 t
ORIGIN
1 ggctgaggcc gcctcccgag ccaggcggac acctgtcctc tggtccggac ggtggctggc
61 tgtctgcggc ccgccaaggg tactgcctca gcggctctgt gcttccgccc gtcccagaag
121 ctgtccggtt ctctggagca ccctctaacc tgttcagact aatttcctaa gttctcgtgt
181 gctacaaatc ttaatgtgag attctacctt gataaagggg agaggactgt gtgtctgttt
241 ctggaacctc tgtgtaaacc tagccttact ctgttctctt agccctgccc atgggctggt
301 gtgtaaaccc tttgttttac agacctacag gataggcctt tggttttagt ctttattcta
361 aggaaattgg ataccacaga ctctcttact gagcatttcc ctcgattcct ctccaccttt
421 ccaatcataa acaccagggc tgaacgacat tgtagataaa taacatgaat agaaacatag
481 tccccttagg ctgagctcac tcttctcatg attgcttatt aatccaattc caacgctgct
541 ccattttagg aaactcattt taaaatttac agaaaaaaaa aacattttag taaagttacc
601 atctaaaact tctatcgaat tagggagtaa tgtatggata tattctagga aaaaacatta
661 atatttctgc aaatagcctg cgtatctt
//