LOCUS BG079429 492 bp mRNA linear EST 12-MAY-2010 DEFINITION H3039F10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3039F10 5', mRNA sequence. ACCESSION BG079429 VERSION BG079429.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 492) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079429.1. Other_ESTs: H3039F10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3039 row: F column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..492 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3039F10-5" /db_xref="taxon:10090" /clone="H3039F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 180 a 103 c 119 g 90 t ORIGIN 1 tgtcagagct gaattaaata tgtcagaatt ggaacagtcc cacttgacaa cactaaagaa 61 atgactgcat aatgaaatct gagagaagga aaagtactcc tggggaagca gcaaagggca 121 aacaacccag tcaaggctgt aaacgtgcgc aaaggacaga acagcaggag ctggaccgaa 181 tatcaaagtg ccaagatcaa aacagtagtg tttgacaaat ccagagtctc ggcagtggaa 241 agaaacccac aagtagcaca gagggaccct cactaactgt actttctggc tgtgaagggc 301 atgagaggca ccttgagaga atgacaaggc aatgaatggc cttaacatcc aaccagccag 361 ccaggaagac aagagttggc agaataaaga ggctgcggcg taatcagtgt gcatctcatg 421 aatcaaatgt tcgataaatg aacccaacaa acaccaaata gtggggtaga tttctcttca 481 ttactcccag aa //