LOCUS BG079128 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3036A10-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3036A10 5', mRNA sequence. ACCESSION BG079128 VERSION BG079128.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079128.1. Other_ESTs: H3036A10-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3036 row: A column: 10 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3036A10-5" /db_xref="taxon:10090" /clone="H3036A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 146 a 124 c 141 g 196 t ORIGIN 1 ggatttcttg gtaaatctta gtttcccagt cctgcagact tgtaagcctc cgctgttttc 61 ggttgtacta gagagcttga gcctgtcatg gatagaggcg tgagaggtgg cccgaccctt 121 tgctgtgtgt atggacttta gcaaggagcc aggcctgcgg attctgtgag gccaaccaag 181 tgtcaccttg tgccttgtac ctggtgactc attcaattga aagtttttgc taaaaggtgg 241 ctctgatttc ttgaaaattt ttctccttcc cgcccccatc cctcttgctt taagtttaga 301 caagataagt ccgaattaaa aggtcatcgt gaaagcaggt ttttaatctt tagatctaga 361 cttttaggca cagcaatttt agagtctctt tgtgttgctg gcaatgacct tgggagattt 421 ctgggttagc atgcttcggg agcactgagt ctttatttgc ctccccccac cccttggtag 481 aaaatttgag ctcatgtgat caagaaggaa cctgtattta tttttgatca gttgtcatgg 541 tgattatgct ggtcagagat aatatagtta tggctaaaat ccaaactgga aatcagaaat 601 cccaaaa //