LOCUS BG079009 605 bp mRNA linear EST 12-MAY-2010 DEFINITION H3034F07-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3034F07 5', mRNA sequence. ACCESSION BG079009 VERSION BG079009.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 605) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG079009.1. Other_ESTs: H3034F07-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3034 row: F column: 07 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..605 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3034F07-5" /db_xref="taxon:10090" /clone="H3034F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 163 a 156 c 102 g 184 t ORIGIN 1 attattcttc ccacacagac acaaacaatc ttccctcatt cactcattca tacaatgcat 61 gcatttggtg tttgtgagct gtgcatgtgt gaatgcacat gtgccatggt tcacaaggca 121 gaagacaact cttatattgt cttggtcctc atcttccccc ttgtttgagg aagtctctct 181 cattgaccct tgaagcatag gtcaggctag cttctgggaa ctgtgccatc tctgcctccc 241 accttcccac taggagcata gggattacag gcatggacta ccggatcaag ctttataaga 301 tttctgcagt tctggactca ggtcatcaga ctttcacagg aggtgcttta cccacgaagc 361 aatctctgcc atacttattt tttaaaaaaa taaaaaccta acatgtaatc ttacacattt 421 taaagtgtag aattatactt gtgctaggca cattcatact gccatgaaac caagctacaa 481 acattttgca tcttgcaaaa caaacactat gcccattgac taattcccta tttctcctgc 541 ccctagactg tggacatcag cattccacct tctgcctccg tgaatctgat tcctctagag 601 atttg //