LOCUS BG078879 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3033B08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3033B08 5', mRNA sequence. ACCESSION BG078879 VERSION BG078879.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG078879.1. Other_ESTs: H3033B08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3033 row: B column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3033B08-5" /db_xref="taxon:10090" /clone="H3033B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 129 a 156 c 188 g 134 t ORIGIN 1 cccgttcttc cggtcgcgag caccccaggg tgtagagggc ggtcgcggcg gtcgcctggg 61 cagcggtggc agaatgttgg cttccagatc gctgagcctg attggcaaga gagccatttc 121 tacttcggtg tgccttcgag cacatgggag tgttgtgaag agtgaagact atgctttccc 181 cacttacgct gatcggcgtg actacccctt gcctgatgtg gcccatgtca cgatgctgtc 241 tgccagccag aaggcgctga aggagaagga gaaggccgac tggagcagcc tttccaggga 301 tgagaaagtt cagttgtacc gcatccagtt taacgagagc ttcgccgaga tgaacagggg 361 caccaatgaa tggaagacag ttgtgggcat ggccatgttc ttcattggct tcactgcgct 421 cgttctgatt tgggagaaga gctatgtgta tggccccatc cctcatactt tcgatcgtga 481 ctgggtggcc atgcagacca agcgaatgct ggacatgaag gccaacccca ttcagggctt 541 ctccgccaag tgggactatg acaagaatga gtggaagaag tgagagcccg ctgcctgccg 601 gctccct //