LOCUS BG078658 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3030D03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3030D03 5', mRNA sequence. ACCESSION BG078658 VERSION BG078658.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG078658.1. Other_ESTs: H3030D03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3030 row: D column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3030D03-5" /db_xref="taxon:10090" /clone="H3030D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 190 a 126 c 126 g 165 t ORIGIN 1 gctccccata cctcatctcg gaagaagagc ataaatagca aaaccgaggg gcatgaaccc 61 aagaaaagca ctgggaagaa aagatgagca cacaccagaa ccgaaagttt ccatgcttat 121 aaagggactt gttgcttagc aaaaagaatg tctaagaaac cttgactgaa gctggtcaga 181 gccagtgatt catgtgttat catgctttac tttatacatc tgtgtatttc tttaaacacc 241 tcgaaagcta gaggacctcc tgtttttatt caaacaagga gctctggcag gatctagaaa 301 tgttcaaaag aatgtctgtc cgctttgtgt aaggaaattc atgacaactg ctattgctgt 361 cactgtgatg attcccatat gcctgtggca gagacaaagg acacaggaac ccggctgact 421 ggtaccaaag tgcactctct tcaggtgcct ctacacacat gcatttctac agaattacac 481 ttagcgagtg ggattggaca ggcaaagatc atgtgttgat gacttttttt aaaaagtaca 541 tttccaaaga gatctcgttg accatttaca ttacaatgtt tttgtcattg ctacagtaac 601 atatgct //