LOCUS BG077748 698 bp mRNA linear EST 12-MAY-2010 DEFINITION H3019C06-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3019C06 5', mRNA sequence. ACCESSION BG077748 VERSION BG077748.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 698) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077748.1. Other_ESTs: H3019C06-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3019 row: C column: 06 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..698 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3019C06-5" /db_xref="taxon:10090" /clone="H3019C06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 148 c 185 g 152 t ORIGIN 1 gtgctggaca gacatgtcga tccctctgga aagttgcaca gccacagact gctcagcaca 61 gagtggggcc tgccttccat tgtgaagtct cttattggtg cagcaagaac gaaaacgtac 121 gtgcaggagc attctgtagt tgacccggta acgaggacaa tggagctcaa gtccaccaac 181 atctcattta caaatatggt ctcagtagat gagaggctga catacaagcc acacctacag 241 gacccagaga aaactgtcct gacccaggaa gccctcatca cagtgaaagg ggtcagcctc 301 agcagctacc tggaaggact catggcaagc accatatctt ccaatgctag caaaggccga 361 gaagcaatgg agtgggtgat acataaactg aacgctgaga ttgaggaatt ggcagcatca 421 gcaagaggaa gcataaggac accaatggcg gcagcggcag cactggtgga caaatgacaa 481 tggaaattgg tgtgcagcat cagggctcca ggactctcaa gctggcatca tattatttgt 541 tatttaaaag acacaattat tttaggtaga tctttttttt taatgaggtg gggtaaggct 601 gtgacttttg atctaaacaa aagatccaga acctctaaat cagagggatc atctgagggg 661 aggatgtaag actgggagag gctgtgttca tgtgaaca //