LOCUS BG077740 670 bp mRNA linear EST 12-MAY-2010 DEFINITION H3019B08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3019B08 5', mRNA sequence. ACCESSION BG077740 VERSION BG077740.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 670) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077740.1. Other_ESTs: H3019B08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3019 row: B column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..670 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3019B08-5" /db_xref="taxon:10090" /clone="H3019B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 139 a 165 c 172 g 194 t ORIGIN 1 ggctgataca cagagccaag ccactgcttc tcatgtggtt gattgtttac aagcctaatt 61 gtaaaaactg aaggcatttt tcctgctgcc ttttcccaaa gtggttaggt ttggaaaatg 121 gataacacta gtattatttt atttgtgctt tttaagccat gtcccccagg tgggaatcgc 181 atgcttgtct tcagactcct actgacctgc ctcatgaggt ttggacatgg ctgtgtgggt 241 tgaggtgact gctgccctca ttgctctttg cctgtctctg ctttatgcct ggaaagcttt 301 ccaggaggtg gaggagaagg gtccttacac ttcctgaggt accgtgtcac ctgcagtgag 361 ttggcaactg gggatgtggg cactgcagct tttattaaag tcatttgaac caaagtggcg 421 ggctgcgtct ctccgtgatc catatgccct cctagcctgg ctgtgcccat catcttgcgc 481 atcttggggg gacttatccc aggcctcagc acctctgctt tctgccgctg tcttgataag 541 aagacagcat ccctggcatc tgccagggaa gagcatcagg ccaggtgatt ctcacttggg 601 cactttatca gggtcaaact tgttgccagt tgacctcagc ctctgcaaac aaagcaggga 661 agcatctgag //