LOCUS BG077694 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3018F03-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3018F03 5', mRNA sequence. ACCESSION BG077694 VERSION BG077694.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077694.1. Other_ESTs: H3018F03-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3018 row: F column: 03 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3018F03-5" /db_xref="taxon:10090" /clone="H3018F03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 151 a 153 c 157 g 146 t ORIGIN 1 agagaagtga aggaattggt tcgtttggtt tttttcttct cccttgaaag acaatttcat 61 gctaatgaaa aacacagcaa aagagtcaga cattcagagg agtccaagat ctactggaag 121 gagctgtgct ctgatgtctt atcgtctgta atggcaacgg tgctttgtaa cctctgagtc 181 gcctggggca ccccagcttg tgctgaacaa ggggctgcga acctgagact gcagtctgct 241 gcacctgtga ccaccctcac ctccagctga tccagagggg cccagaggca cgagtccagg 301 acagtcttgg cacacatctg gtacctgagc tgcacagcca gatagtaata gaattcatca 361 caggaccagc aaacacagct ctgctacagt tcacccatca gtttccaagg tgaatgtggc 421 tgctgctcac agcttggcct ctggtctgtg gctcaaattc tgctgagact gtatcgaggg 481 tggtgacttc agctctctac cataaagact gggactgttc ctggaaatct agggaggaga 541 catctgtcca ggtgacccct cccatggtgg cagacctaga acagggtagg tatcctacct 601 acaggtt //