LOCUS BG077338 643 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014B08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014B08 5', mRNA sequence. ACCESSION BG077338 VERSION BG077338.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 643) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077338.1. Other_ESTs: H3014B08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3014 row: B column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..643 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014B08-5" /db_xref="taxon:10090" /clone="H3014B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 157 a 160 c 161 g 165 t ORIGIN 1 ggacctcaga aggatctttg cttactttat tagacctccc cccctcccct ttgataccct 61 ccttcctgtg gtcctagctg gcactggctc attacctaca aaacccaaaa cggtagctta 121 agactacgtg caacatcctg ccccggggtt ttgctgccca gactctgaaa agttgggact 181 ctgtgaagcc ctgcttacca cgagcctctt tctgttccta acagtagttt acaaggacac 241 agatggtttg tattgtcatc ggatccagtt gtcatggacc catgcctggg gagatctgga 301 caaaggcttt tcaaggctct gagtgatcta agccaaatat ttgactctaa acaggtgtcc 361 atgggcaaaa acactgaccc acttgaaaaa aaccaactgt cctcccaaag cacaaggcat 421 cccagtatcc cttgggtgcc acctgtccct tccccatcag cctttctgcc atagaggact 481 ggatagccat gctgggctcg gctgggcagt caaggcaagg cagggtattg ggaaaggggt 541 gggagttgtt ttataacggt gctgagggag gagtggaggg gcggaggctg gtcctaagga 601 aagtaacagt ggctgagaaa atagttttga atttttttta att //