LOCUS BG077138 662 bp mRNA linear EST 12-MAY-2010 DEFINITION H3011C05-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3011C05 5', mRNA sequence. ACCESSION BG077138 VERSION BG077138.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 662) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077138.1. Other_ESTs: H3011C05-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3011 row: C column: 05 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..662 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3011C05-5" /db_xref="taxon:10090" /clone="H3011C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 190 a 141 c 170 g 161 t ORIGIN 1 caaggtgatt gtaactcagg cacttttagc tattgaaaac ggctcctccc ctgaaatttg 61 gttatctatg ctcaagaatt agtcagcatg agattagatg agagagactc aacgatcatt 121 gatcagccct tgctcatcaa tagggtgatc atgatttccc cactaattca atttttggct 181 ggcctctttt gcagagttcg ccctaggtca tttagcagtt attgtcacac agcactgcgg 241 tatccagaga cgggcaactt tcctcgtgca cagtccaacc taagacatgg ggcccggtgg 301 cgatagggtt accctatgac gggtaaggct gtgacattag aggaacgacc taaaacagga 361 gccacggcgg atgggcataa ttgcacaggc ctagtccagc ctcattttat taaaacaaac 421 agggggagat gtgggaagcc acatgtgccg ttgccgagtg gcactgacta ctgctggcca 481 ccatgcataa gattggacaa acaaccaatg tgtacatatg cagtaaagtt ttttgcaaaa 541 acactgccag gcccaggcat gataatgagg ttctgtaagg tactgagagt ataaccaatc 601 ggatgtgaga catgcaaatg aggtatgata aggaggctca gtgaggtact gagagagagt 661 ag //