LOCUS BG076824 622 bp mRNA linear EST 12-MAY-2010 DEFINITION H3006F04-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3006F04 5', mRNA sequence. ACCESSION BG076824 VERSION BG076824.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 622) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076824.1. Other_ESTs: H3006F04-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3006 row: F column: 04 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..622 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3006F04-5" /db_xref="taxon:10090" /clone="H3006F04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 147 a 164 c 158 g 153 t ORIGIN 1 ctatgagcgc attcaccgca gcaacttggt tggcatgggg gtgatccccc ttgagtatct 61 ccctggtgaa actgcagact ctctgggact cacaggtcgg gaaagataca ctatcaacat 121 ccctgaagac ctcaagcctc gcatgacggt gcagatcaag ctggacactg ggaagacctt 181 ccaggccgtg atgaggttcg acactgatgt ggagctcacg tacttccaca atggaggcat 241 cctgaactac atgatccgaa agatggccca gtaggtgctg acctctcagg agacccgcac 301 ttggtgctag acccaatgag gaaccaggcc cccactggtg gaggcctggc agagcagcca 361 catctacttc tgatgagggt gctggcagga tgagcaagtg ggcactgcca ttcctggagg 421 cacagagcca ggagtctcta gttttgtgat ttgttcatct ttttatccct ttctgtaatc 481 tggattctag aatcacggga aggtccgtag taccaaagag aactcgcttc tctttaaagt 541 cacggacatt gatttttttc cctctgacta atcttgagct cagcactagc cagtattctc 601 agaagtggct cctacccttt ct //