LOCUS BG076504 586 bp mRNA linear EST 12-MAY-2010 DEFINITION H3159G05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3159G05 3', mRNA sequence. ACCESSION BG076504 VERSION BG076504.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 586) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076504.1. Other_ESTs: H3159G05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3159 row: G column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..586 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3159G05-3" /db_xref="taxon:10090" /clone="H3159G05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 168 a 128 c 169 g 121 t ORIGIN 1 ttcacacttt attgagaacc aaatggggct tagctgctta ctctgaggac caaggcagca 61 cacagacaga tctaatctct caggccaggc cggggattct cgggtctagt acattcctcc 121 aaccatcact gagggaaggg ctggatacag ggcagagaca agggatagga ggagactaat 181 gaagaaatgg agagcccgag gacccagagg cttggctgag ggaagggctg ggaagaggaa 241 atggaggaat agggaatgga aaggagaaga aagctgcacg tggtaagagc tagggccagc 301 agagcactca tgagtattcc cccaggtctg ggctttgtaa tcctactttg ggttccaaaa 361 ggccatcttt gcaaagattg gcttggagag gaagcggctg ctcttcatgt agtcagatat 421 cttcttcagg ccctcaaagc gacccatgaa gtccttcagg tttgggaagg catccaggca 481 cttgggctca aatattcggt gttgatcaag gacatcataa acaagaaaat ccacataggt 541 gaccttgttc cctgcaaacc atggctgctt gcccagaaac tcagag //