LOCUS BG076383 534 bp mRNA linear EST 26-JAN-2001 DEFINITION H3159C01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3159C01 3', mRNA sequence. ACCESSION BG076383 VERSION BG076383.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 534) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3159C01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3159 row: C column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..534 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3159C01-3" /db_xref="taxon:10090" /clone="H3159C01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 142 c 153 g 55 t ORIGIN 1 ggggaaagcc aacatcggga taaaaaaagg tttaaaaaaa ccaggacaaa aaacaccggg 61 ggggccctta ataattcccc aaacgaaaca gaaaaaaggg cagggggccc catttaaaaa 121 aaacccactt tctaaaaaaa agggaaataa tttccgctgg ccggggggaa ggcttaatcc 181 aagggggccc atggccggtt aacacacccg gccggggaag ggggggcgaa aaaggaaaag 241 gggcccacag gactacggcc cggggaacca aaaaaccatt aaaaaggggg ccccggttcc 301 caacagggcg gttggggccc taaccacaag ggaaccgccg aagttccaaa gcaaagggac 361 ctgaaggact aaaaacgggg ccacggttcc aaaaagaaaa agggcaaacg ggaaaacgga 421 cccaatccta gcacccccag ggcctccttt ggcagctaag ggcagggcag caggaggttg 481 acccccccct ccccctagaa acgccaaggc ctccggatag ccccaaaggg aaac //